Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | BCF11_1368 | Not Available | Negative | 1512105 - 1513112 | 36616.7 |
| dna-binding laci/purr family transcriptional regulator | BCF11_1369 | Not Available | Negative | 1513139 - 1514209 | 39010.8 |
| acetyltransferase (gnat) family protein | BCF11_1370 | Not Available | Negative | 1514325 - 1514780 | 17269.8 |
| nte family protein | BCF11_1371 | Not Available | Positive | 1514920 - 1515780 | 30428.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1515955 - 1516067 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1516261 - 1519136 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1519465 - 1519540 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1519550 - 1519626 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1519748 - 1521284 | Not Available |
| putative mg2+ transporter-c (mgtc) family protein | BCF11_1377 | Not Available | Negative | 1521859 - 1522563 | 24993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
