Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | BCF11_1295 | Not Available | Negative | 1413512 - 1414162 | 24339.1 |
| putative mfs family arabinose efflux permease | BCF11_1296 | Not Available | Negative | 1414252 - 1415454 | 41405.7 |
| cyanate lyase | BCF11_1297 | Not Available | Negative | 1415538 - 1416008 | 17024.7 |
| carbonic anhydrase | BCF11_1298 | Not Available | Negative | 1416061 - 1416723 | 23012.6 |
| lysr family cyn operon transcriptional activator | BCF11_1299 | Not Available | Positive | 1416837 - 1417727 | 31943.7 |
| multidrug efflux pump subunit acrb | BCF11_1300 | Not Available | Negative | 1417815 - 1420883 | 110627.0 |
| rnd family efflux transporter mfp subunit | BCF11_1301 | Not Available | Negative | 1420897 - 1422039 | 40019.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | BCF11_1302 | Not Available | Negative | 1422069 - 1423559 | 52420.6 |
| rare lipoprotein a | BCF11_1303 | Not Available | Positive | 1424075 - 1424725 | 22929.2 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | BCF11_1304 | Not Available | Negative | 1424748 - 1425152 | 15435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
