Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b561 | BCF11_1233 | Not Available | Positive | 1353071 - 1353595 | 19434.8 |
| polyisoprenoid-binding protein ycei | BCF11_1234 | Not Available | Positive | 1353623 - 1354198 | 20289.3 |
| polyisoprenoid-binding protein ycei | BCF11_1235 | Not Available | Positive | 1354234 - 1354806 | 20638.7 |
| alkaline phosphatase d | BCF11_1236 | Not Available | Positive | 1354957 - 1356585 | 60340.3 |
| protein of unknown function (duf2946) | BCF11_1237 | Not Available | Positive | 1356877 - 1357245 | 12822.6 |
| hypothetical protein | BCF11_1238 | Not Available | Positive | 1357326 - 1358351 | 36409.0 |
| uncharacterized protein duf3761 | BCF11_1239 | Not Available | Positive | 1358641 - 1359156 | 16176.1 |
| putative membrane protein yeaq/ymge (transglycosylase-associated protein family) | BCF11_1240 | Not Available | Positive | 1359349 - 1359594 | 8080.53 |
| nucleoside-diphosphate-sugar epimerase | BCF11_1241 | Not Available | Negative | 1359676 - 1360890 | 44547.2 |
| outer membrane scaffolding protein for murein synthesis (mipa/ompv family) | BCF11_1242 | Not Available | Negative | 1360915 - 1361730 | 28765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
