Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing membrane protein | BCF11_1080 | Not Available | Negative | 1197962 - 1199134 | 42033.6 |
| branched-chain amino acid transport system substrate-binding protein | BCF11_1081 | Not Available | Negative | 1199167 - 1200324 | 41027.4 |
| gntr family transcriptional repressor for pyruvate dehydrogenase complex | BCF11_1082 | Not Available | Positive | 1200592 - 1201350 | 27007.2 |
| 3-hydroxyisobutyrate dehydrogenase | BCF11_1083 | Not Available | Positive | 1201364 - 1202257 | 30377.0 |
| uncharacterized protein ygbk (duf1537 family) | BCF11_1084 | Not Available | Positive | 1202261 - 1203574 | 45894.4 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | BCF11_1085 | Not Available | Positive | 1203571 - 1204218 | 23609.6 |
| d-galactonate transporter | BCF11_1086 | Not Available | Positive | 1204272 - 1205594 | 48651.5 |
| hydroxypyruvate isomerase | BCF11_1087 | Not Available | Positive | 1205617 - 1206405 | 29060.6 |
| nucleoside-diphosphate-sugar epimerase | BCF11_1088 | Not Available | Positive | 1206436 - 1207413 | 34666.8 |
| small conductance mechanosensitive channel | BCF11_1089 | Not Available | Positive | 1207548 - 1209809 | 81861.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
