Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yop protein translocation protein k (ysck) | BCF11_1019 | Not Available | Negative | 1132476 - 1133312 | 31407.9 |
| type iii secretion protein j | BCF11_1020 | Not Available | Negative | 1133326 - 1134138 | 29549.1 |
| hypothetical protein | BCF11_1021 | Not Available | Negative | 1134177 - 1134584 | 14373.9 |
| tetratricopeptide repeat protein | BCF11_1022 | Not Available | Negative | 1134631 - 1135089 | 17007.5 |
| hypothetical protein | BCF11_1023 | Not Available | Negative | 1135125 - 1135325 | 6570.6 |
| hypothetical protein | BCF11_1024 | Not Available | Negative | 1135404 - 1135655 | 9436.42 |
| type iii secretion system (t3ss) inner membrane yop/yscd-like protein | BCF11_1025 | Not Available | Negative | 1135656 - 1136822 | 41896.6 |
| regulatory luxr family protein | BCF11_1026 | Not Available | Positive | 1137459 - 1138301 | 31732.0 |
| gtp-binding protein | BCF11_1027 | Not Available | Negative | 1138431 - 1140266 | 67974.5 |
| trna pseudouridine55 synthase | BCF11_1028 | Not Available | Negative | 1140526 - 1141479 | 34437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
