Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein v | BCF11_1009 | Not Available | Negative | 1122981 - 1125113 | 77743.0 |
| type iii secretion protein u | BCF11_1010 | Not Available | Negative | 1125139 - 1126206 | 40118.0 |
| type iii secretion protein t | BCF11_1011 | Not Available | Negative | 1126203 - 1126991 | 29054.2 |
| type iii secretion protein s | BCF11_1012 | Not Available | Negative | 1127003 - 1127269 | 9265.96 |
| type iii secretion protein r | BCF11_1013 | Not Available | Negative | 1127284 - 1127934 | 23901.2 |
| type iii secretion system yscq/hrcq family protein | BCF11_1014 | Not Available | Negative | 1127950 - 1129008 | 39295.1 |
| hypothetical protein | BCF11_1015 | Not Available | Negative | 1129131 - 1129970 | 29219.5 |
| hypothetical protein | BCF11_1016 | Not Available | Negative | 1129973 - 1130488 | 20461.5 |
| type iii secretion protein n (atpase) | BCF11_1017 | Not Available | Negative | 1130490 - 1131815 | 48045.9 |
| type iii secretion system hrpe/yscl family protein | BCF11_1018 | Not Available | Negative | 1131815 - 1132498 | 24955.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
