Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (tigr00645 family) | BCF11_0906 | Not Available | Positive | 1011631 - 1012245 | 22365.9 |
| homodimeric fumarase (class i) | BCF11_0907 | Not Available | Positive | 1012303 - 1013859 | 56460.5 |
| glutamate racemase | BCF11_0908 | Not Available | Positive | 1013872 - 1014738 | 29923.4 |
| Trna-his | Not Available | Not Available | Positive | 1014839 - 1014911 | Not Available |
| aspartate racemase | BCF11_0910 | Not Available | Negative | 1015097 - 1015789 | 25186.4 |
| dna-binding transcriptional mocr family regulator | BCF11_0911 | Not Available | Positive | 1015851 - 1017221 | 49237.6 |
| diketogulonate reductase-like aldo/keto reductase | BCF11_0912 | Not Available | Negative | 1017327 - 1018175 | 31094.6 |
| dopa 4,5-dioxygenase | BCF11_0913 | Not Available | Negative | 1018230 - 1018625 | 14337.2 |
| hypothetical protein | BCF11_0914 | Not Available | Positive | 1018756 - 1019184 | 15607.6 |
| rna polymerase sigma factor (sigma-70 family) | BCF11_0915 | Not Available | Positive | 1019268 - 1019840 | 21845.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
