Candidatus Omnitrophica bacterium

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Candidatus Omnitrophica is a bacterium characterized by its possession of four replicons, which may indicate a complex genomic architecture. This organism is notable for its potential metabolic versatility, allowing it to thrive in diverse environments. The bacterium has been cataloged under several accession numbers, including PCVW00000000.1, PCWB00000000.1, PEWV00000000.1, and PFGP00000000.1, which provide a basis for further genomic analysis and characterization. The presence of multiple replicons in Candidatus Omnitrophica suggests that it may have a unique mechanism for gene regulation and replication, which could contribute to its adaptability in varying ecological niches. This adaptability is crucial in microbial ecosystems, where competition for resources and environmental changes can significantly influence survival and proliferation. Ecologically, Candidatus Omnitrophica may play a role in nutrient cycling, potentially participating in processes such as organic matter decomposition or biogeochemical transformations. Its metabolic capabilities could enable it to utilize a wide range of substrates, which is advantageous in fluctuating environments. Understanding the specific ecological roles of Candidatus Omnitrophica will require further investigation, but its genomic characteristics provide a promising foundation for exploring its contributions to microbial communities and ecosystem functioning.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Omnitrophica bacterium

Gene Summary

Adenine Count

372316 bp

Thymine Count

356301 bp

Guanine Count

283128 bp

Cytosine Count

259990 bp

Genome Length

1274469 bp

Protein-coding Genes

1276 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCOW11_02995Not AvailablePositive551370 - 55223632090.5
30s ribosomal protein s1COW11_03000Not AvailablePositive552245 - 55379557262.2
tyrosine--trna ligaseCOW11_03005Not AvailablePositive553804 - 55500945755.9
hypothetical proteinCOW11_03010Not AvailablePositive557098 - 55755917914.8
Trna-ileNot AvailableNot AvailablePositive557916 - 557991Not Available
Trna-alaNot AvailableNot AvailablePositive558163 - 558238Not Available
hypothetical proteinCOW11_03030Not AvailableNegative559560 - 56020425410.9
hypothetical proteinCOW11_03035Not AvailablePositive560919 - 56137717760.5
orotate phosphoribosyltransferaseCOW11_03040Not AvailablePositive561399 - 56199521390.3
aaa family atpaseCOW11_03045Not AvailablePositive562079 - 56321243834.2

Displaying genes 591 – 600 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.