Candidatus Omnitrophica bacterium

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Candidatus Omnitrophica is a bacterium characterized by its possession of four replicons, which may indicate a complex genomic architecture. This organism is notable for its potential metabolic versatility, allowing it to thrive in diverse environments. The bacterium has been cataloged under several accession numbers, including PCVW00000000.1, PCWB00000000.1, PEWV00000000.1, and PFGP00000000.1, which provide a basis for further genomic analysis and characterization. The presence of multiple replicons in Candidatus Omnitrophica suggests that it may have a unique mechanism for gene regulation and replication, which could contribute to its adaptability in varying ecological niches. This adaptability is crucial in microbial ecosystems, where competition for resources and environmental changes can significantly influence survival and proliferation. Ecologically, Candidatus Omnitrophica may play a role in nutrient cycling, potentially participating in processes such as organic matter decomposition or biogeochemical transformations. Its metabolic capabilities could enable it to utilize a wide range of substrates, which is advantageous in fluctuating environments. Understanding the specific ecological roles of Candidatus Omnitrophica will require further investigation, but its genomic characteristics provide a promising foundation for exploring its contributions to microbial communities and ecosystem functioning.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Omnitrophica bacterium

Gene Summary

Adenine Count

372316 bp

Thymine Count

356301 bp

Guanine Count

283128 bp

Cytosine Count

259990 bp

Genome Length

1274469 bp

Protein-coding Genes

1276 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell filamentation protein ficCOS99_06785Not AvailablePositive1509433 - 151056343119.8
hypothetical proteinCOS99_06790Not AvailablePositive1510607 - 151104717165.9
duf4172 domain-containing proteinCOS99_06795Not AvailablePositive1511386 - 151251343009.0
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabCOS99_06800Not AvailablePositive1512500 - 151381649495.3
hypothetical proteinCOS99_06805Not AvailablePositive1513813 - 151466432620.8
trna (adenosine(37)-n6)-dimethylallyltransferase miaaCOS99_06810Not AvailablePositive1514642 - 151560136226.9
gtpase hflxCOS99_06815Not AvailablePositive1515607 - 151687246478.1
heat-inducible transcription repressor hrcaCOS99_06820Not AvailablePositive1516980 - 151801739522.8
nucleotide exchange factor grpeCOS99_06825Not AvailablePositive1518023 - 151865523864.6
molecular chaperone dnakCOS99_06830Not AvailablePositive1518742 - 152064969313.8

Displaying genes 2661 – 2670 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.