Candidatus Omnitrophica bacterium

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Candidatus Omnitrophica is a bacterium characterized by its possession of four replicons, which may indicate a complex genomic architecture. This organism is notable for its potential metabolic versatility, allowing it to thrive in diverse environments. The bacterium has been cataloged under several accession numbers, including PCVW00000000.1, PCWB00000000.1, PEWV00000000.1, and PFGP00000000.1, which provide a basis for further genomic analysis and characterization. The presence of multiple replicons in Candidatus Omnitrophica suggests that it may have a unique mechanism for gene regulation and replication, which could contribute to its adaptability in varying ecological niches. This adaptability is crucial in microbial ecosystems, where competition for resources and environmental changes can significantly influence survival and proliferation. Ecologically, Candidatus Omnitrophica may play a role in nutrient cycling, potentially participating in processes such as organic matter decomposition or biogeochemical transformations. Its metabolic capabilities could enable it to utilize a wide range of substrates, which is advantageous in fluctuating environments. Understanding the specific ecological roles of Candidatus Omnitrophica will require further investigation, but its genomic characteristics provide a promising foundation for exploring its contributions to microbial communities and ecosystem functioning.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Omnitrophica bacterium

Gene Summary

Adenine Count

372316 bp

Thymine Count

356301 bp

Guanine Count

283128 bp

Cytosine Count

259990 bp

Genome Length

1274469 bp

Protein-coding Genes

1276 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-alaNot AvailableNot AvailablePositive1351487 - 1351562Not Available
ferrous iron transport protein aCOS99_06040Not AvailablePositive1351913 - 13521468430.85
ferrous iron transporter bCOS99_06045Not AvailablePositive1352146 - 135387363831.3
hypothetical proteinCOS99_06050Not AvailablePositive1354286 - 135580055348.4
16s rrna (uracil(1498)-n(3))-methyltransferaseCOS99_06055Not AvailablePositive1355797 - 135652526988.8
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabCOS99_06060Not AvailablePositive1356526 - 135778247394.1
hypothetical proteinCOS99_06065Not AvailablePositive1357786 - 135851127423.2
ngg1p interacting factor nif3COS99_06070Not AvailablePositive1358649 - 135960235075.0
dna primaseCOS99_06075Not AvailablePositive1359566 - 136140769686.0
rna polymerase sigma factor rpodCOS99_06080Not AvailablePositive1361377 - 136310466780.6

Displaying genes 2511 – 2520 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.