Candidatus Omnitrophica bacterium

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Candidatus Omnitrophica is a bacterium characterized by its possession of four replicons, which may indicate a complex genomic architecture. This organism is notable for its potential metabolic versatility, allowing it to thrive in diverse environments. The bacterium has been cataloged under several accession numbers, including PCVW00000000.1, PCWB00000000.1, PEWV00000000.1, and PFGP00000000.1, which provide a basis for further genomic analysis and characterization. The presence of multiple replicons in Candidatus Omnitrophica suggests that it may have a unique mechanism for gene regulation and replication, which could contribute to its adaptability in varying ecological niches. This adaptability is crucial in microbial ecosystems, where competition for resources and environmental changes can significantly influence survival and proliferation. Ecologically, Candidatus Omnitrophica may play a role in nutrient cycling, potentially participating in processes such as organic matter decomposition or biogeochemical transformations. Its metabolic capabilities could enable it to utilize a wide range of substrates, which is advantageous in fluctuating environments. Understanding the specific ecological roles of Candidatus Omnitrophica will require further investigation, but its genomic characteristics provide a promising foundation for exploring its contributions to microbial communities and ecosystem functioning.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Omnitrophica bacterium

Gene Summary

Adenine Count

372316 bp

Thymine Count

356301 bp

Guanine Count

283128 bp

Cytosine Count

259990 bp

Genome Length

1274469 bp

Protein-coding Genes

1276 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine--trna ligaseCOS99_02685Not AvailableNegative648814 - 65004046340.5
ferredoxinCOS99_02690Not AvailablePositive650152 - 65068218941.1
30s ribosomal protein s1COS99_02695Not AvailableNegative650712 - 65232860194.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCOS99_02700Not AvailableNegative652331 - 65321232816.2
1-acyl-sn-glycerol-3-phosphate acyltransferaseCOS99_02705Not AvailableNegative653196 - 65385824685.8
cytidylate kinaseCOS99_02710Not AvailableNegative653851 - 65451324604.2
prephenate dehydrogenase/arogenate dehydrogenase family proteinCOS99_02715Not AvailableNegative654521 - 65536630574.7
3-deoxy-7-phosphoheptulonate synthaseCOS99_02720Not AvailableNegative655375 - 65639137039.7
histidinol-phosphate transaminaseCOS99_02725Not AvailableNegative656471 - 65756841250.6
prephenate dehydrataseCOS99_02730Not AvailableNegative657565 - 65862940184.2

Displaying genes 1851 – 1860 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.