Candidatus Omnitrophica bacterium

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Candidatus Omnitrophica is a bacterium characterized by its possession of four replicons, which may indicate a complex genomic architecture. This organism is notable for its potential metabolic versatility, allowing it to thrive in diverse environments. The bacterium has been cataloged under several accession numbers, including PCVW00000000.1, PCWB00000000.1, PEWV00000000.1, and PFGP00000000.1, which provide a basis for further genomic analysis and characterization. The presence of multiple replicons in Candidatus Omnitrophica suggests that it may have a unique mechanism for gene regulation and replication, which could contribute to its adaptability in varying ecological niches. This adaptability is crucial in microbial ecosystems, where competition for resources and environmental changes can significantly influence survival and proliferation. Ecologically, Candidatus Omnitrophica may play a role in nutrient cycling, potentially participating in processes such as organic matter decomposition or biogeochemical transformations. Its metabolic capabilities could enable it to utilize a wide range of substrates, which is advantageous in fluctuating environments. Understanding the specific ecological roles of Candidatus Omnitrophica will require further investigation, but its genomic characteristics provide a promising foundation for exploring its contributions to microbial communities and ecosystem functioning.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Omnitrophica bacterium

Gene Summary

Adenine Count

372316 bp

Thymine Count

356301 bp

Guanine Count

283128 bp

Cytosine Count

259990 bp

Genome Length

1274469 bp

Protein-coding Genes

1276 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine synthaseCOS99_00665Not AvailablePositive115263 - 11631537193.0
cofactor-independent phosphoglycerate mutaseCOS99_00670Not AvailablePositive116317 - 11752243722.7
aspartate kinaseCOS99_00675Not AvailablePositive117560 - 11881345057.1
citramalate synthaseCOS99_00680Not AvailablePositive118829 - 12039758159.5
valine--trna ligaseCOS99_00685Not AvailablePositive120467 - 123172105210.0
nicotinate-nucleotide diphosphorylase (carboxylating)COS99_00690Not AvailablePositive123169 - 12406833494.1
excinuclease abc subunit bCOS99_00695Not AvailablePositive124227 - 12622175553.2
biotin--[acetyl-coa-carboxylase] ligaseCOS99_00700Not AvailablePositive126235 - 12719435888.7
pantothenate kinaseCOS99_00705Not AvailablePositive127208 - 12797827983.8
co-chaperone groesCOS99_00710Not AvailablePositive128159 - 12844910414.7

Displaying genes 1451 – 1460 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.