Pseudomonas sp. MYb115 MYb115_85

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MYb115, represented by the accession PCQM00000000.1, is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and regulation within its ecological niche. This trait is significant as it often correlates with adaptability and resource utilization in various environments. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil, water, and as plant symbionts or pathogens. The single replicon may enhance the organism's ability to respond to environmental changes swiftly, contributing to its survival and competitiveness. The ecological insight into Pseudomonas sp. MYb115 lies in its potential interactions within microbial communities. The metabolic capabilities of Pseudomonas species, coupled with the streamlined genomic structure indicated by the presence of a single replicon, suggest that MYb115 could play a significant role in nutrient cycling and biodegradation processes in its environment. This adaptability likely positions it as an important player in maintaining ecological balance, especially in nutrient-rich or contaminated environments where microbial competition is fierce. Overall, the genomic and ecological characteristics of Pseudomonas sp. MYb115 underscore its potential significance in environmental microbiology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MYb115
StrainMYb115_85

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MYb115 MYb115_85
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MYb115 MYb115_85, whole genome shotgun sequence.

Gene Summary

Adenine Count

1244234 bp

Thymine Count

1227466 bp

Guanine Count

1883710 bp

Cytosine Count

1907596 bp

Genome Length

6263738 bp

Protein-coding Genes

5543 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-alpha-hydroxysteroid dehydrogenaseCQZ98_27160Not AvailablePositive5893571 - 589433825644.8
short-chain dehydrogenaseCQZ98_27165Not AvailablePositive5894351 - 589518428617.4
4-hydroxy-2-oxovalerate aldolaseCQZ98_27170Not AvailableNegative5895254 - 589628236472.4
acetaldehyde dehydrogenase (acetylating)CQZ98_27175Not AvailableNegative5896293 - 589721932512.6
2-oxopent-4-enoate hydrataseCQZ98_27180Not AvailableNegative5897244 - 589803528324.1
short-chain dehydrogenaseCQZ98_27185Not AvailableNegative5898105 - 589887826706.1
flavin-dependent monooxygenaseCQZ98_27190Not AvailablePositive5899628 - 590081543975.3
3-ketosteroid-9-alpha-hydroxylaseCQZ98_27195Not AvailablePositive5900894 - 590191636858.4
fatty acid--coa ligaseCQZ98_27200Not AvailablePositive5901930 - 590353157045.0
hypothetical proteinCQZ98_27205Not AvailablePositive5903629 - 590527559527.9

Displaying genes 5341 – 5350 of 5673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.