Pseudomonas sp. MYb115 MYb115_85

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MYb115, represented by the accession PCQM00000000.1, is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient replication and regulation within its ecological niche. This trait is significant as it often correlates with adaptability and resource utilization in various environments. Pseudomonas species are known for their metabolic versatility, allowing them to thrive in diverse habitats, including soil, water, and as plant symbionts or pathogens. The single replicon may enhance the organism's ability to respond to environmental changes swiftly, contributing to its survival and competitiveness. The ecological insight into Pseudomonas sp. MYb115 lies in its potential interactions within microbial communities. The metabolic capabilities of Pseudomonas species, coupled with the streamlined genomic structure indicated by the presence of a single replicon, suggest that MYb115 could play a significant role in nutrient cycling and biodegradation processes in its environment. This adaptability likely positions it as an important player in maintaining ecological balance, especially in nutrient-rich or contaminated environments where microbial competition is fierce. Overall, the genomic and ecological characteristics of Pseudomonas sp. MYb115 underscore its potential significance in environmental microbiology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MYb115
StrainMYb115_85

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MYb115 MYb115_85
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MYb115 MYb115_85, whole genome shotgun sequence.

Gene Summary

Adenine Count

1244234 bp

Thymine Count

1227466 bp

Guanine Count

1883710 bp

Cytosine Count

1907596 bp

Genome Length

6263738 bp

Protein-coding Genes

5543 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinohemoprotein amine dehydrogenase subunit alphaCQZ98_15085Not AvailableNegative3209585 - 321116556970.6
haloacid dehalogenaseCQZ98_15090Not AvailablePositive3211479 - 321214124030.8
rna polymerase subunit sigmaCQZ98_15095Not AvailablePositive3212477 - 321299819573.7
iron dicitrate transport regulator fecrCQZ98_15100Not AvailablePositive3212995 - 321396035483.3
tonb-dependent siderophore receptorCQZ98_15105Not AvailablePositive3214037 - 321651790644.2
aldehyde dehydrogenaseCQZ98_15110Not AvailablePositive3216686 - 321817653003.1
fad-dependent oxidoreductaseCQZ98_15115Not AvailableNegative3218213 - 321950847622.8
peptidase s8 and s53 subtilisin kexin sedolisinCQZ98_15120Not AvailableNegative3219505 - 322018224193.6
abc transporter atp-binding proteinCQZ98_15125Not AvailableNegative3220172 - 322189062697.1
sigma-54-dependent fis family transcriptional regulatorCQZ98_15130Not AvailableNegative3221890 - 322379468754.1

Displaying genes 3011 – 3020 of 5673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.