Pseudomonas poae strain MYb117

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas poae strain MYb117 is a soil-dwelling bacterium known for its interactions with various plant hosts. It has been identified to inhabit the soil environment, which suggests its potential role in soil health and plant interactions. This strain is characterized by having a single replicon, indicating a streamlined genetic organization that may facilitate adaptability and efficiency in its ecological niche. The known hosts for Pseudomonas poae strain MYb117 include Triticum aestivum (common wheat), Pseudostellaria heterophylla (Chinese herbal plant), and Allium sativum (garlic). This range of host associations points to the bacterium's versatility and its potential importance in agricultural and ecological contexts. Its ability to interact with key crop species may suggest a role in promoting plant growth, disease resistance, or nutrient cycling in soil ecosystems. The strain is cataloged under the accession number PCQL00000000.1, which provides a reference for further genomic and functional studies. Understanding the specific mechanisms through which Pseudomonas poae strain MYb117 interacts with its plant hosts could yield insights into its ecological functions and applications in sustainable agriculture. This bacterium exemplifies the intricate relationships between soil microorganisms and plant life, underscoring the importance of microbial diversity in supporting healthy ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas poae
Strainstrain MYb117

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas poae strain MYb117
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Triticum aestivum, Pseudostellaria heterophylla, Allium sativum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas poae strain MYb117 MYb117_81, whole genome shotgun

Gene Summary

Adenine Count

1259964 bp

Thymine Count

1260620 bp

Guanine Count

1917026 bp

Cytosine Count

1911170 bp

Genome Length

6349152 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vapc toxin family pin domain ribonucleaseCQZ99_00035Not AvailableNegative5940 - 635015106.4
5s ribosomal rnaNot AvailableNot AvailablePositive6572 - 6687Not Available
prevent-host-death proteinCQZ99_00040Not AvailableNegative6350 - 66049271.02
cytochrome-c oxidase, cbb3-type subunit iiiCQZ99_00045Not AvailableNegative6733 - 766533543.1
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneCQZ99_00050Not AvailableNegative7662 - 78627295.56
cytochrome-c oxidase, cbb3-type subunit iiCQZ99_00055Not AvailableNegative7866 - 847422733.5
cytochrome-c oxidase, cbb3-type subunit iCQZ99_00060Not AvailableNegative8485 - 990952956.3
alpha/beta hydrolaseCQZ99_00065Not AvailablePositive9989 - 1068124799.0
chemotaxis proteinCQZ99_00070Not AvailableNegative10784 - 1234957025.5
eama family transporterCQZ99_00075Not AvailableNegative12491 - 1338731731.1

Displaying genes 81 – 90 of 5709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.