Pseudomonas poae strain MYb117

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas poae strain MYb117 is a soil-dwelling bacterium known for its interactions with various plant hosts. It has been identified to inhabit the soil environment, which suggests its potential role in soil health and plant interactions. This strain is characterized by having a single replicon, indicating a streamlined genetic organization that may facilitate adaptability and efficiency in its ecological niche. The known hosts for Pseudomonas poae strain MYb117 include Triticum aestivum (common wheat), Pseudostellaria heterophylla (Chinese herbal plant), and Allium sativum (garlic). This range of host associations points to the bacterium's versatility and its potential importance in agricultural and ecological contexts. Its ability to interact with key crop species may suggest a role in promoting plant growth, disease resistance, or nutrient cycling in soil ecosystems. The strain is cataloged under the accession number PCQL00000000.1, which provides a reference for further genomic and functional studies. Understanding the specific mechanisms through which Pseudomonas poae strain MYb117 interacts with its plant hosts could yield insights into its ecological functions and applications in sustainable agriculture. This bacterium exemplifies the intricate relationships between soil microorganisms and plant life, underscoring the importance of microbial diversity in supporting healthy ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas poae
Strainstrain MYb117

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas poae strain MYb117
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Triticum aestivum, Pseudostellaria heterophylla, Allium sativum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas poae strain MYb117 MYb117_81, whole genome shotgun

Gene Summary

Adenine Count

1259964 bp

Thymine Count

1260620 bp

Guanine Count

1917026 bp

Cytosine Count

1911170 bp

Genome Length

6349152 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-tyrosyl-trna(tyr) deacylaseCQZ99_01495Not AvailablePositive339493 - 33993015427.7
glucan biosynthesis protein gCQZ99_01500Not AvailablePositive340198 - 34194665325.2
glucans biosynthesis glucosyltransferase mdohCQZ99_01505Not AvailablePositive341939 - 34450996457.2
amino acid abc transporter substrate-binding proteinCQZ99_01510Not AvailablePositive344694 - 34549429109.7
amino acid abc transporter substrate-binding proteinCQZ99_01515Not AvailablePositive345714 - 34651129674.9
abc transporter permeaseCQZ99_01520Not AvailablePositive346643 - 34760235019.9
peptide abc transporter atp-binding proteinCQZ99_01525Not AvailablePositive347595 - 34832926993.0
chemotaxis proteinCQZ99_01530Not AvailableNegative348324 - 35023168390.9
methyl-accepting chemotaxis proteinCQZ99_01535Not AvailableNegative350379 - 35229567901.6
16s rrna (uracil(1498)-n(3))-methyltransferaseCQZ99_01540Not AvailableNegative352498 - 35320525969.2

Displaying genes 371 – 380 of 5709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.