Pseudomonas lurida strain MYb17 MYb17_36

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lurida strain MYb17, identified by the accession number PCQF00000000.1, is a bacterial strain characterized by its single replicon. This organism is typically found in various habitats, including air and rainwater, indicating its adaptability to different environmental conditions. The ecological significance of Pseudomonas lurida strain MYb17 lies in its presence in airborne and aqueous environments. This suggests that it may play a role in nutrient cycling and microbial diversity in these ecosystems. The strain's ability to thrive in rainwater could also imply potential interactions with other microbial communities present in this habitat, contributing to ecological processes such as decomposition and organic matter turnover. Additionally, the single replicon structure of its genome may influence its genetic stability and adaptability, allowing it to respond effectively to environmental changes. Understanding strains like Pseudomonas lurida MYb17 enhances our knowledge of microbial ecology, particularly in relation to how bacteria interact with their surroundings and the roles they play in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lurida
Strainstrain MYb17 MYb17_36

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lurida strain MYb17 MYb17_36
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatair; rainwater
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lurida strain MYb17 MYb17_36, whole genome shotgun

Gene Summary

Adenine Count

1172836 bp

Thymine Count

1198444 bp

Guanine Count

1868137 bp

Cytosine Count

1822180 bp

Genome Length

6061908 bp

Protein-coding Genes

5371 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlmlCQ005_08790Not AvailablePositive1884893 - 188715784902.5
ggdef domain-containing proteinCQ005_08795Not AvailablePositive1887299 - 188969889638.8
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseCQ005_08800Not AvailableNegative1889740 - 189120052424.1
duf469 domain-containing proteinCQ005_08805Not AvailablePositive1891437 - 189178112700.0
hypothetical proteinCQ005_08810Not AvailableNegative1891819 - 189300941074.0
gntr family transcriptional regulatorCQ005_08815Not AvailablePositive1893236 - 189400028140.6
guanine deaminaseCQ005_08820Not AvailableNegative1894142 - 189544647918.1
xanthine dehydrogenase accessory protein xdhcCQ005_08825Not AvailableNegative1895454 - 189631131005.6
xanthine dehydrogenase molybdopterin binding subunitCQ005_08830Not AvailableNegative1896427 - 189882687619.5
xanthine dehydrogenase small subunitCQ005_08835Not AvailableNegative1898819 - 190026752829.1

Displaying genes 1761 – 1770 of 5485 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.