Pseudomonas sp. MYb187

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MYb187 is characterized by having a single replicon, which suggests a streamlined genomic organization that may be advantageous for adaptability and survival in various environments. Its genomic information is accessible through the accession number PCOA00000000.1, indicating that it is cataloged within genomic databases for further study and reference. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil and water environments. This adaptability often allows them to play crucial roles in nutrient cycling and biodegradation processes. The specific traits and behaviors of Pseudomonas sp. MYb187, while not detailed here, likely contribute to its ecological role, particularly in environments where it may interact with other microorganisms or contribute to biogeochemical processes. Understanding the genomic features of Pseudomonas sp. MYb187, including its single replicon structure, can provide insights into its evolutionary adaptations and potential applications in biotechnology or environmental management. Microorganisms like Pseudomonas sp. MYb187 may be pivotal in bioremediation efforts or agricultural practices, given their capacity to degrade pollutants or enhance soil health. The analysis of its genome could reveal further details about its metabolic pathways and ecological interactions, highlighting the significance of this species in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MYb187
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MYb187
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MYb187 MYb187_contig000042, whole genome shotgun

Gene Summary

Adenine Count

1110133 bp

Thymine Count

1101925 bp

Guanine Count

1754020 bp

Cytosine Count

1776721 bp

Genome Length

5742799 bp

Protein-coding Genes

5108 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseCQ065_09360Not AvailablePositive2007407 - 200826730042.2
tetr/acrr family transcriptional regulatorCQ065_09365Not AvailableNegative2008336 - 200900425723.6
4-hydroxyphenylpyruvate dioxygenaseCQ065_09370Not AvailableNegative2009071 - 201097870277.2
mfs transporterCQ065_09375Not AvailablePositive2011279 - 201261949037.1
eama/rhat family transporterCQ065_09380Not AvailableNegative2012616 - 201349431391.7
sugar phosphate isomerase/epimeraseCQ065_09385Not AvailableNegative2013511 - 201432629912.8
iclr family transcriptional regulatorCQ065_09390Not AvailableNegative2014423 - 201519927694.1
fad-binding dehydrogenaseCQ065_09395Not AvailablePositive2015372 - 201709661270.4
protocatechuate 3,4-dioxygenase subunit alphaCQ065_09400Not AvailableNegative2017165 - 201777022491.4
protocatechuate 3,4-dioxygenase subunit betaCQ065_09405Not AvailableNegative2017781 - 201850026884.9

Displaying genes 1881 – 1890 of 5253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.