Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CMO32_42015 | Not Available | Positive | 8937567 - 8938310 | 27140.1 |
| nicotinamidase/pyrazinamidase | CMO32_42020 | Not Available | Positive | 8938396 - 8939121 | 25330.2 |
| abc transporter substrate-binding protein | CMO32_42025 | Not Available | Positive | 8939229 - 8940362 | 39114.3 |
| ferredoxin | CMO32_42030 | Not Available | Positive | 8940340 - 8940846 | 17287.9 |
| aldehyde dehydrogenase | CMO32_42035 | Not Available | Positive | 8940843 - 8944586 | 130647.0 |
| fumarylacetoacetate hydrolase | CMO32_42040 | Not Available | Positive | 8944789 - 8945979 | 41576.8 |
| type vi secretion system protein tssa | CMO32_42045 | Not Available | Positive | 8946160 - 8947251 | 39581.3 |
| type vi secretion system contractile sheath small subunit | CMO32_42050 | Not Available | Positive | 8947313 - 8947882 | 20591.4 |
| type vi secretion system contractile sheath large subunit | CMO32_42055 | Not Available | Positive | 8947916 - 8949421 | 56526.4 |
| hcp1 family type vi secretion system effector | CMO32_42060 | Not Available | Positive | 8949467 - 8949949 | 17200.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
