Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CMO32_40360 | Not Available | Negative | 8599252 - 8600700 | 52547.4 |
| rna polymerase sigma factor rpos | CMO32_40365 | Not Available | Negative | 8600752 - 8601765 | 35316.0 |
| peptidase | CMO32_40370 | Not Available | Negative | 8601770 - 8602684 | 31394.1 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CMO32_40375 | Not Available | Negative | 8602696 - 8603487 | 27628.8 |
| 5'/3'-nucleotidase sure | CMO32_40380 | Not Available | Negative | 8603489 - 8604247 | 27083.2 |
| nadph:quinone oxidoreductase | CMO32_40385 | Not Available | Positive | 8604378 - 8605364 | 34409.9 |
| histidine biosynthesis protein hisie | CMO32_40390 | Not Available | Negative | 8605476 - 8605823 | 12518.8 |
| Trna-his | Not Available | Not Available | Positive | 8606180 - 8606255 | Not Available |
| ybhb/ybcl family raf kinase inhibitor-like protein | CMO32_40400 | Not Available | Negative | 8606333 - 8606989 | 22826.9 |
| glsb/yeaq/ymge family stress response membrane protein | CMO32_40405 | Not Available | Positive | 8607193 - 8607441 | 8412.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
