Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretin | CMO32_39860 | Not Available | Positive | 8499932 - 8502082 | 76369.4 |
| shikimate kinase | CMO32_39865 | Not Available | Positive | 8502106 - 8502669 | 18400.2 |
| 3-dehydroquinate synthase | CMO32_39870 | Not Available | Positive | 8502766 - 8503887 | 39485.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | CMO32_39875 | Not Available | Positive | 8503925 - 8505076 | 43098.0 |
| mfs transporter | CMO32_39880 | Not Available | Positive | 8505073 - 8506338 | 42968.6 |
| peptidase | CMO32_39885 | Not Available | Positive | 8506335 - 8506910 | 20914.6 |
| sam-dependent methyltransferase | CMO32_39890 | Not Available | Positive | 8506907 - 8507815 | 32564.3 |
| hypothetical protein | CMO32_39895 | Not Available | Negative | 8507834 - 8508541 | 23857.3 |
| transposase | CMO32_39900 | Not Available | Positive | 8508626 - 8509321 | 25915.9 |
| glutamate synthase subunit alpha | CMO32_39905 | Not Available | Positive | 8509505 - 8514259 | 172055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
