Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | CMO32_39390 | Not Available | Positive | 8394970 - 8396001 | 35084.3 |
| abc transporter substrate-binding protein | CMO32_39395 | Not Available | Positive | 8396053 - 8397066 | 36174.4 |
| abc transporter permease | CMO32_39400 | Not Available | Positive | 8397103 - 8397933 | 29105.0 |
| abc transporter permease | CMO32_39405 | Not Available | Positive | 8397941 - 8398741 | 28874.1 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | CMO32_39410 | Not Available | Positive | 8398731 - 8399804 | 37785.8 |
| phosphodiesterase | CMO32_39415 | Not Available | Positive | 8399801 - 8400664 | 31043.0 |
| hypothetical protein | CMO32_39420 | Not Available | Positive | 8400759 - 8402420 | 59717.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CMO32_39430 | Not Available | Negative | 8403190 - 8404746 | 54001.5 |
| cell division protein | CMO32_39435 | Not Available | Negative | 8404749 - 8406497 | 63578.7 |
| cell division protein ftsl | CMO32_39440 | Not Available | Negative | 8406494 - 8406859 | 13460.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
