Variovorax sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. is a bacterial species identified from an Antarctic specimen, specifically located in the Barton Peninsula on King George Island. This organism exhibits a rod-shaped morphology, which is characteristic of many members within the Variovorax genus. Notably, Variovorax sp. has been characterized by having a single replicon, which indicates a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The genomic data for this species can be accessed under the accession number PBYB00000000.1, providing a basis for further genetic and ecological studies. The ecological significance of Variovorax sp. in its Antarctic habitat may be tied to its potential roles in biogeochemical cycles, particularly in nutrient cycling within extreme environments. The adaptability and resilience of this bacterial species to cold, harsh conditions underscore the importance of microbial life in polar ecosystems, contributing to the understanding of microbial diversity and function in extreme habitats. Further research could elucidate the specific ecological roles of Variovorax sp. and its interactions within the Antarctic microbial community.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAntarctic specimen; Antarctica; Barton Peninsula; King George Island
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Variovorax sp. isolate NP4 MHASMcontig_837532, whole genome

Gene Summary

Adenine Count

1423611 bp

Thymine Count

1430467 bp

Guanine Count

3192501 bp

Cytosine Count

3198003 bp

Genome Length

9279585 bp

Protein-coding Genes

8352 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane lipoprotein carrier protein lolaCMO32_39290Not AvailableNegative8372936 - 837357422814.2
cell division protein ftskCMO32_39295Not AvailableNegative8373730 - 837616588273.2
crp/fnr family transcriptional regulatorCMO32_39300Not AvailableNegative8376302 - 837697624982.6
thioredoxin-disulfide reductaseCMO32_39305Not AvailablePositive8377165 - 837812434388.0
50s ribosomal protein l28CMO32_39310Not AvailablePositive8378363 - 83785968793.68
50s ribosomal protein l33CMO32_39315Not AvailablePositive8378608 - 83787816547.1
acyl-coa desaturaseCMO32_39320Not AvailableNegative8378924 - 838013846068.7
sam-dependent methyltransferaseCMO32_39325Not AvailableNegative8380272 - 838154346542.9
peptidase m48CMO32_39330Not AvailableNegative8381572 - 838342570306.0
duf1653 domain-containing proteinCMO32_39335Not AvailablePositive8383496 - 83837358977.69

Displaying genes 7571 – 7580 of 8403 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.