Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family oxidoreductase | CMO32_03495 | Not Available | Negative | 731059 - 731754 | 25233.8 |
| mfs transporter | CMO32_03500 | Not Available | Negative | 731816 - 733228 | 50563.9 |
| 4-hydroxyphenylpyruvate dioxygenase | CMO32_03505 | Not Available | Negative | 733289 - 735166 | 67705.5 |
| alpha/beta hydrolase | CMO32_03510 | Not Available | Negative | 735358 - 736122 | 27164.4 |
| mfs transporter | CMO32_03515 | Not Available | Negative | 736119 - 737348 | 43116.4 |
| carboxymuconolactone decarboxylase | CMO32_03520 | Not Available | Negative | 737345 - 737770 | 15672.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | CMO32_03525 | Not Available | Negative | 737806 - 739005 | 41971.9 |
| shikimate dehydrogenase | CMO32_03530 | Not Available | Negative | 739173 - 740006 | 29321.4 |
| shikimate dehydrogenase | CMO32_03535 | Not Available | Negative | 740033 - 740947 | 32263.8 |
| 4-hydroxyphenylpyruvate dioxygenase | CMO32_03540 | Not Available | Positive | 741148 - 741933 | 28811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
