Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | CMO32_03240 | Not Available | Negative | 674603 - 675166 | 19548.4 |
| hypothetical protein | CMO32_03245 | Not Available | Negative | 675361 - 675810 | 16353.0 |
| lysr family transcriptional regulator | CMO32_03250 | Not Available | Negative | 675913 - 676836 | 33311.0 |
| hypothetical protein | CMO32_03255 | Not Available | Positive | 676875 - 677957 | 37906.2 |
| diguanylate cyclase | CMO32_03260 | Not Available | Positive | 677964 - 678650 | 24267.0 |
| amino acid abc transporter substrate-binding protein | CMO32_03265 | Not Available | Positive | 678685 - 679587 | 32672.5 |
| methyltransferase | CMO32_03270 | Not Available | Positive | 679612 - 680277 | 23365.1 |
| diguanylate cyclase | CMO32_03275 | Not Available | Positive | 680313 - 680978 | 21267.7 |
| aspartate aminotransferase | CMO32_03280 | Not Available | Positive | 680975 - 682204 | 41580.8 |
| alpha/beta hydrolase | CMO32_03285 | Not Available | Negative | 682212 - 682892 | 24023.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
