Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | CMO32_31810 | Not Available | Negative | 6778683 - 6779681 | 34918.3 |
| coa transferase | CMO32_31815 | Not Available | Negative | 6779715 - 6780923 | 43203.0 |
| enoyl-coa hydratase | CMO32_31820 | Not Available | Negative | 6780997 - 6781806 | 28242.8 |
| pimeloyl-coa dehydrogenase small subunit | CMO32_31825 | Not Available | Negative | 6781803 - 6782945 | 40430.3 |
| pimeloyl-coa dehydrogenase large subunit | CMO32_31830 | Not Available | Negative | 6782958 - 6784166 | 44174.0 |
| acetyl-coa c-acyltransferase | CMO32_31835 | Not Available | Negative | 6784177 - 6785367 | 42002.4 |
| 3-hydroxyacyl-coa dehydrogenase | CMO32_31840 | Not Available | Negative | 6785398 - 6787533 | 75768.5 |
| lysr family transcriptional regulator | CMO32_31845 | Not Available | Positive | 6787714 - 6788616 | 33512.7 |
| hypothetical protein | CMO32_31850 | Not Available | Negative | 6788600 - 6789328 | 27042.9 |
| 3-isopropylmalate dehydratase large subunit | CMO32_31855 | Not Available | Positive | 6789442 - 6790848 | 49393.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
