Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | CMO32_01920 | Not Available | Negative | 388677 - 389198 | 19322.4 |
| peptidoglycan-binding protein | CMO32_01925 | Not Available | Positive | 389359 - 390573 | 44074.9 |
| dna-protecting protein dpra | CMO32_01930 | Not Available | Positive | 390590 - 391744 | 40222.3 |
| duf494 domain-containing protein | CMO32_01935 | Not Available | Positive | 391872 - 392390 | 19182.7 |
| hypothetical protein | CMO32_01940 | Not Available | Negative | 392404 - 394779 | 85815.5 |
| protein translocase subunit secf | CMO32_01945 | Not Available | Negative | 394945 - 395898 | 35047.1 |
| protein translocase subunit secd | CMO32_01950 | Not Available | Negative | 395911 - 397803 | 67961.5 |
| preprotein translocase subunit yajc | CMO32_01955 | Not Available | Negative | 397897 - 398229 | 11588.6 |
| indolepyruvate ferredoxin oxidoreductase | CMO32_01960 | Not Available | Negative | 398561 - 402163 | 130609.0 |
| lrp/asnc family transcriptional regulator | CMO32_01965 | Not Available | Positive | 402342 - 402818 | 17518.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
