Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbl | CMO32_14780 | Not Available | Negative | 3110850 - 3112214 | 44907.5 |
| hypothetical protein | CMO32_14785 | Not Available | Negative | 3112211 - 3112477 | 9493.54 |
| p-type conjugative transfer protein trbj | CMO32_14790 | Not Available | Negative | 3112485 - 3113243 | 27561.8 |
| conjugal transfer protein trbe | CMO32_14795 | Not Available | Negative | 3113240 - 3115699 | 90455.2 |
| conjugal transfer protein trbd | CMO32_14800 | Not Available | Negative | 3115709 - 3115990 | 9824.13 |
| conjugal transfer protein trbc | CMO32_14805 | Not Available | Negative | 3115987 - 3116319 | 11429.2 |
| p-type conjugative transfer atpase trbb | CMO32_14810 | Not Available | Negative | 3116316 - 3117362 | 37145.7 |
| conjugal transfer protein trag | CMO32_14820 | Not Available | Negative | 3117865 - 3119922 | 74613.9 |
| lysr family transcriptional regulator | CMO32_14825 | Not Available | Negative | 3120262 - 3121389 | 41306.5 |
| branched-chain amino acid abc transporter substrate-binding protein | CMO32_14830 | Not Available | Negative | 3121549 - 3122868 | 47405.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
