Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | CMO32_14515 | Not Available | Positive | 3051378 - 3053543 | 80120.8 |
| peptidase m20 | CMO32_14520 | Not Available | Negative | 3053649 - 3054923 | 43996.2 |
| hypothetical protein | CMO32_14530 | Not Available | Positive | 3055568 - 3056326 | 26195.3 |
| type i-f crispr-associated helicase cas3 | CMO32_14540 | Not Available | Positive | 3056651 - 3059974 | 123410.0 |
| type i-f crispr-associated protein csy1 | CMO32_14545 | Not Available | Positive | 3060058 - 3061458 | 52384.1 |
| type i-f crispr-associated protein csy2 | CMO32_14550 | Not Available | Positive | 3061455 - 3062513 | 38941.5 |
| type i-f crispr-associated protein csy3 | CMO32_14555 | Not Available | Positive | 3062577 - 3063593 | 36897.7 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | CMO32_14560 | Not Available | Positive | 3063600 - 3064175 | 21789.4 |
| aldehyde dehydrogenase | CMO32_14565 | Not Available | Negative | 3066754 - 3069048 | 82594.5 |
| (2fe-2s)-binding protein | CMO32_14570 | Not Available | Negative | 3069045 - 3069530 | 17235.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
