Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | CMO32_12550 | Not Available | Negative | 2627640 - 2628443 | 26876.7 |
| n,n-dimethylformamidase | CMO32_12555 | Not Available | Negative | 2628461 - 2629847 | 50219.3 |
| lanthionine synthetase | CMO32_12560 | Not Available | Negative | 2629848 - 2630155 | 11583.7 |
| lysr family transcriptional regulator | CMO32_12565 | Not Available | Negative | 2630161 - 2631075 | 33447.2 |
| alpha/beta hydrolase | CMO32_12570 | Not Available | Positive | 2631260 - 2632144 | 29997.8 |
| efflux transporter periplasmic adaptor subunit | CMO32_12575 | Not Available | Positive | 2632364 - 2633620 | 43915.2 |
| rnd transporter | CMO32_12585 | Not Available | Positive | 2637135 - 2638721 | 53884.6 |
| marr family transcriptional regulator | CMO32_12590 | Not Available | Negative | 2638639 - 2639184 | 19236.3 |
| abc transporter substrate-binding protein | CMO32_12595 | Not Available | Positive | 2639325 - 2640302 | 34430.0 |
| hypothetical protein | CMO32_12600 | Not Available | Negative | 2640313 - 2640537 | 8200.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
