Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CMO32_11885 | Not Available | Negative | 2493293 - 2494024 | 26745.4 |
| hypothetical protein | CMO32_11890 | Not Available | Negative | 2494172 - 2494585 | 14700.3 |
| hit domain-containing protein | CMO32_11895 | Not Available | Negative | 2494596 - 2495045 | 16123.4 |
| fad-linked oxidase | CMO32_11900 | Not Available | Negative | 2495042 - 2498920 | 140811.0 |
| phosphoglycerate dehydrogenase | CMO32_11905 | Not Available | Negative | 2499061 - 2500293 | 43789.9 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | CMO32_11910 | Not Available | Positive | 2500525 - 2501838 | 47630.3 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | CMO32_11915 | Not Available | Positive | 2501967 - 2502848 | 32929.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | CMO32_11920 | Not Available | Positive | 2502912 - 2503760 | 31013.0 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | CMO32_11925 | Not Available | Positive | 2503778 - 2504785 | 36978.1 |
| glycerophosphodiester phosphodiesterase | CMO32_11930 | Not Available | Positive | 2504793 - 2505533 | 26557.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
