Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CMO32_09980 | Not Available | Positive | 2106030 - 2107910 | 67181.9 |
| Trna-ser | Not Available | Not Available | Positive | 2108052 - 2108141 | Not Available |
| serine--trna ligase | CMO32_09990 | Not Available | Negative | 2108223 - 2109554 | 48454.9 |
| threonine dehydratase | CMO32_09995 | Not Available | Negative | 2109605 - 2110570 | 33320.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CMO32_10000 | Not Available | Negative | 2110567 - 2111535 | 34939.0 |
| peptidylprolyl isomerase | CMO32_10005 | Not Available | Negative | 2111567 - 2112019 | 15931.7 |
| hypothetical protein | CMO32_10010 | Not Available | Positive | 2112127 - 2112804 | 23449.7 |
| dna mismatch repair protein muts | CMO32_10015 | Not Available | Positive | 2112804 - 2113499 | 24274.3 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | CMO32_10020 | Not Available | Negative | 2113533 - 2115608 | 71669.1 |
| ferredoxin reductase | CMO32_10025 | Not Available | Negative | 2115760 - 2116983 | 42451.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
