Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | CMO32_08735 | Not Available | Negative | 1848842 - 1849888 | 38633.3 |
| hypothetical protein | CMO32_08740 | Not Available | Negative | 1849927 - 1851129 | 42642.3 |
| hypothetical protein | CMO32_08745 | Not Available | Negative | 1850601 - 1851392 | 28890.3 |
| type vi secretion system membrane subunit tssm | CMO32_08750 | Not Available | Negative | 1851397 - 1855419 | 145639.0 |
| type vi secretion system protein tssl | CMO32_08755 | Not Available | Negative | 1855440 - 1856834 | 49950.5 |
| hypothetical protein | CMO32_08760 | Not Available | Negative | 1856822 - 1857412 | 21281.2 |
| type vi secretion system baseplate subunit tssk | CMO32_08765 | Not Available | Negative | 1857531 - 1858886 | 49521.5 |
| type vi secretion system lipoprotein tssj | CMO32_08770 | Not Available | Negative | 1858916 - 1859422 | 18814.0 |
| type vi secretion system tube protein hcp | CMO32_08775 | Not Available | Negative | 1859473 - 1859958 | 17707.8 |
| type vi secretion system contractile sheath large subunit | CMO32_08780 | Not Available | Negative | 1860039 - 1861541 | 55996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
