Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | CMO32_00820 | Not Available | Positive | 168001 - 169458 | 51995.9 |
| tripartite tricarboxylate transporter substrate binding protein | CMO32_00825 | Not Available | Positive | 169500 - 170483 | 34632.4 |
| abc transporter atp-binding protein | CMO32_00835 | Not Available | Positive | 171906 - 172655 | 26425.4 |
| abc transporter atp-binding protein | CMO32_00840 | Not Available | Positive | 172642 - 173340 | 24365.7 |
| branched-chain amino acid abc transporter permease | CMO32_00845 | Not Available | Positive | 173351 - 174217 | 30244.0 |
| branched-chain amino acid abc transporter permease | CMO32_00850 | Not Available | Positive | 174224 - 175282 | 37285.2 |
| class ii histone deacetylase | CMO32_00855 | Not Available | Positive | 175254 - 176366 | 39440.0 |
| hypothetical protein | CMO32_00865 | Not Available | Positive | 177378 - 177581 | 7246.42 |
| porin | CMO32_00870 | Not Available | Positive | 177791 - 178849 | 36804.4 |
| mfs transporter | CMO32_00875 | Not Available | Positive | 178988 - 180301 | 46919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
