Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family lipoprotein | CMO32_07955 | Not Available | Positive | 1683984 - 1684619 | 21052.1 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | CMO32_07960 | Not Available | Negative | 1684636 - 1685586 | 32726.5 |
| serine protease | CMO32_07970 | Not Available | Positive | 1686341 - 1687561 | 42416.4 |
| 50s ribosomal protein l13 | CMO32_07975 | Not Available | Positive | 1687739 - 1688167 | 15622.1 |
| 30s ribosomal protein s9 | CMO32_07980 | Not Available | Positive | 1688180 - 1688572 | 14283.3 |
| iron-sulfur cluster insertion protein erpa | CMO32_07985 | Not Available | Positive | 1688776 - 1689141 | 12923.1 |
| mfs transporter | CMO32_07990 | Not Available | Positive | 1689230 - 1690672 | 50401.3 |
| anhydro-n-acetylmuramic acid kinase | CMO32_07995 | Not Available | Negative | 1690674 - 1691804 | 38704.3 |
| peptidase m23 | CMO32_08000 | Not Available | Negative | 1691867 - 1693216 | 47455.8 |
| tyrosine--trna ligase | CMO32_08005 | Not Available | Positive | 1693375 - 1694607 | 44940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
