Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | CMO32_07595 | Not Available | Positive | 1607722 - 1608708 | 34198.8 |
| salicylate hydroxylase | CMO32_07600 | Not Available | Positive | 1608863 - 1610023 | 41057.7 |
| hypothetical protein | CMO32_07605 | Not Available | Positive | 1610053 - 1610274 | 8078.56 |
| 3-phenylpropionate dioxygenase | CMO32_07610 | Not Available | Positive | 1610285 - 1611331 | 39645.4 |
| oxidoreductase | CMO32_07615 | Not Available | Positive | 1611349 - 1611765 | 15213.3 |
| had family hydrolase | CMO32_07620 | Not Available | Positive | 1612008 - 1612697 | 24336.1 |
| thioredoxin | CMO32_07625 | Not Available | Positive | 1612807 - 1613133 | 11646.9 |
| lysr family transcriptional regulator | CMO32_07630 | Not Available | Negative | 1613121 - 1614038 | 32379.5 |
| 3-phosphoglycerate dehydrogenase | CMO32_07635 | Not Available | Positive | 1614109 - 1615101 | 36165.7 |
| helix-turn-helix transcriptional regulator | CMO32_07640 | Not Available | Positive | 1615154 - 1615960 | 29512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
