Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | CMO32_07340 | Not Available | Positive | 1548881 - 1549441 | 20713.9 |
| type vi secretion system baseplate subunit tssf | CMO32_07345 | Not Available | Positive | 1549460 - 1551349 | 69413.8 |
| tetr family transcriptional regulator | CMO32_07350 | Not Available | Negative | 1551358 - 1551978 | 21785.0 |
| glyoxalase | CMO32_07355 | Not Available | Positive | 1552060 - 1552488 | 14912.9 |
| multidrug abc transporter atp-binding protein | CMO32_07360 | Not Available | Negative | 1552631 - 1554535 | 68465.7 |
| lysr family transcriptional regulator | CMO32_07365 | Not Available | Negative | 1554563 - 1555507 | 34350.8 |
| dioxygenase | CMO32_07370 | Not Available | Positive | 1555614 - 1556444 | 29053.7 |
| glycosyl transferase | CMO32_07375 | Not Available | Negative | 1556414 - 1558057 | 59182.9 |
| cytochrome b | CMO32_07380 | Not Available | Positive | 1558056 - 1558616 | 20812.8 |
| alpha/beta hydrolase | CMO32_07385 | Not Available | Positive | 1558613 - 1559503 | 32001.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
