Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | CMO32_05750 | Not Available | Positive | 1228065 - 1231745 | 136339.0 |
| type vi secretion system-associated protein tagf | CMO32_05755 | Not Available | Positive | 1231745 - 1232461 | 25828.4 |
| serine/threonine protein kinase | CMO32_05760 | Not Available | Positive | 1232490 - 1234487 | 69438.8 |
| cysteine hydrolase | CMO32_05765 | Not Available | Negative | 1234504 - 1235046 | 19456.3 |
| atp-dependent protease | CMO32_05770 | Not Available | Negative | 1235100 - 1236638 | 54082.0 |
| hypothetical protein | CMO32_05775 | Not Available | Positive | 1236853 - 1237731 | 31058.3 |
| transcriptional regulator | CMO32_05780 | Not Available | Positive | 1237796 - 1238134 | 12274.0 |
| ammonia channel protein | CMO32_05785 | Not Available | Positive | 1238164 - 1239585 | 47676.5 |
| lysr family transcriptional regulator | CMO32_05795 | Not Available | Positive | 1240798 - 1241691 | 32005.3 |
| fad-binding oxidoreductase | CMO32_05800 | Not Available | Positive | 1241837 - 1243339 | 52705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
