Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CMO32_05700 | Not Available | Positive | 1216402 - 1218921 | 91199.5 |
| hypothetical protein | CMO32_05705 | Not Available | Positive | 1218918 - 1219967 | 38187.0 |
| hypothetical protein | CMO32_05710 | Not Available | Positive | 1220011 - 1220673 | 23617.2 |
| duf4150 domain-containing protein | CMO32_05715 | Not Available | Positive | 1220687 - 1221067 | 13541.1 |
| serine/threonine-protein phosphatase | CMO32_05720 | Not Available | Negative | 1221084 - 1221902 | 29262.2 |
| type vi secretion system-associated fha domain protein tagh | CMO32_05725 | Not Available | Negative | 1221895 - 1224030 | 74525.9 |
| hypothetical protein | CMO32_05730 | Not Available | Negative | 1224076 - 1224492 | 15159.3 |
| type vi secretion system lipoprotein tssj | CMO32_05735 | Not Available | Positive | 1224618 - 1225133 | 18896.8 |
| type vi secretion system baseplate subunit tssk | CMO32_05740 | Not Available | Positive | 1225323 - 1226705 | 51098.5 |
| type vi secretion system protein tssl | CMO32_05745 | Not Available | Positive | 1226714 - 1228063 | 48947.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
