Variovorax sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. is a bacterial species identified from an Antarctic specimen, specifically located in the Barton Peninsula on King George Island. This organism exhibits a rod-shaped morphology, which is characteristic of many members within the Variovorax genus. Notably, Variovorax sp. has been characterized by having a single replicon, which indicates a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The genomic data for this species can be accessed under the accession number PBYB00000000.1, providing a basis for further genetic and ecological studies. The ecological significance of Variovorax sp. in its Antarctic habitat may be tied to its potential roles in biogeochemical cycles, particularly in nutrient cycling within extreme environments. The adaptability and resilience of this bacterial species to cold, harsh conditions underscore the importance of microbial life in polar ecosystems, contributing to the understanding of microbial diversity and function in extreme habitats. Further research could elucidate the specific ecological roles of Variovorax sp. and its interactions within the Antarctic microbial community.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAntarctic specimen; Antarctica; Barton Peninsula; King George Island
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Variovorax sp. isolate NP4 MHASMcontig_837532, whole genome

Gene Summary

Adenine Count

1423611 bp

Thymine Count

1430467 bp

Guanine Count

3192501 bp

Cytosine Count

3198003 bp

Genome Length

9279585 bp

Protein-coding Genes

8352 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMO32_05700Not AvailablePositive1216402 - 121892191199.5
hypothetical proteinCMO32_05705Not AvailablePositive1218918 - 121996738187.0
hypothetical proteinCMO32_05710Not AvailablePositive1220011 - 122067323617.2
duf4150 domain-containing proteinCMO32_05715Not AvailablePositive1220687 - 122106713541.1
serine/threonine-protein phosphataseCMO32_05720Not AvailableNegative1221084 - 122190229262.2
type vi secretion system-associated fha domain protein taghCMO32_05725Not AvailableNegative1221895 - 122403074525.9
hypothetical proteinCMO32_05730Not AvailableNegative1224076 - 122449215159.3
type vi secretion system lipoprotein tssjCMO32_05735Not AvailablePositive1224618 - 122513318896.8
type vi secretion system baseplate subunit tsskCMO32_05740Not AvailablePositive1225323 - 122670551098.5
type vi secretion system protein tsslCMO32_05745Not AvailablePositive1226714 - 122806348947.4

Displaying genes 1101 – 1110 of 8403 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.