Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Antarctic specimen; Antarctica; Barton Peninsula; King George Island |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1423611 bp
Thymine Count
1430467 bp
Guanine Count
3192501 bp
Cytosine Count
3198003 bp
Genome Length
9279585 bp
Protein-coding Genes
8352 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter atp-binding protein urtd | CMO32_05645 | Not Available | Negative | 1201964 - 1202842 | 31486.1 |
| urea abc transporter permease subunit urtc | CMO32_05650 | Not Available | Negative | 1202839 - 1204065 | 43765.4 |
| urea abc transporter permease subunit urtb | CMO32_05655 | Not Available | Negative | 1204062 - 1205609 | 53943.4 |
| hypothetical protein | CMO32_05665 | Not Available | Positive | 1206543 - 1207127 | 19957.7 |
| type vi secretion system baseplate subunit tsse | CMO32_05670 | Not Available | Positive | 1207127 - 1207684 | 20177.0 |
| type vi secretion system baseplate subunit tssf | CMO32_05675 | Not Available | Positive | 1207684 - 1209564 | 69144.4 |
| type vi secretion system baseplate subunit tssg | CMO32_05680 | Not Available | Positive | 1209561 - 1210745 | 42471.5 |
| type vi secretion system atpase tssh | CMO32_05685 | Not Available | Positive | 1210742 - 1213471 | 96910.1 |
| type vi secretion system tip protein vgrg | CMO32_05690 | Not Available | Positive | 1213487 - 1215880 | 87852.0 |
| hypothetical protein | CMO32_05695 | Not Available | Positive | 1215880 - 1216356 | 16799.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
