Rubrivirga sp.

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Rubricoccaceae

Genus

Rubrivirga

Description

Rubrivirga sp. is a genus of bacteria characterized by the presence of a single replicon, indicating a simplified genomic structure. The specific strain associated with this genus is represented by the accession number PBTV00000000.1, which provides a reference for genomic studies and further classification within the microbial community. Rubrivirga sp. is notable for its ecological role, likely contributing to biogeochemical cycling in its native environment. While specific metabolic capabilities and habitat preferences are not provided, the simplicity of having a single replicon may suggest adaptations that allow for efficient replication and survival in a specific ecological niche. The genomic data associated with this organism could provide insights into its evolutionary strategies and interactions within microbial communities. The understanding of Rubrivirga sp. can help elucidate its function within ecosystems, particularly in environments where such bacteria might thrive. Its single replicon may also suggest evolutionary advantages in certain conditions, potentially allowing it to adapt quickly to environmental changes. Further research, focusing on its ecological interactions and metabolic processes, could enhance our understanding of its role in microbial diversity and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilyRubricoccaceae
GenusRubrivirga
SpeciesRubrivirga sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rubrivirga sp. isolate NP52 16110, whole genome shotgun

Gene Summary

Adenine Count

368720 bp

Thymine Count

373450 bp

Guanine Count

607658 bp

Cytosine Count

612370 bp

Genome Length

1965511 bp

Protein-coding Genes

1952 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCMN22_09315Not AvailablePositive1820494 - 18207128158.62
aminomethyltransferaseCMN22_09320Not AvailablePositive1821048 - 182175525823.4
gtp cyclohydrolase i foleCMN22_09325Not AvailableNegative1822160 - 182273820829.0
cell division protein ftshCMN22_09330Not AvailableNegative1822747 - 182472371198.0
hypoxanthine phosphoribosyltransferaseCMN22_09335Not AvailableNegative1824807 - 182536120211.3
trna lysidine(34) synthetase tilsCMN22_09340Not AvailableNegative1825351 - 182635536511.2
coenzyme f420 biosynthesis-associated proteinCMN22_09345Not AvailableNegative1826352 - 182738638098.5
hypothetical proteinCMN22_09350Not AvailableNegative1827416 - 182847137570.5
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseCMN22_09355Not AvailableNegative1828453 - 182981446604.6
inorganic pyrophosphataseCMN22_09360Not AvailablePositive1829962 - 183039616588.5

Displaying genes 1841 – 1850 of 2004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.