Rubrivirga sp.

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Rubricoccaceae

Genus

Rubrivirga

Description

Rubrivirga sp. is a genus of bacteria characterized by the presence of a single replicon, indicating a simplified genomic structure. The specific strain associated with this genus is represented by the accession number PBTV00000000.1, which provides a reference for genomic studies and further classification within the microbial community. Rubrivirga sp. is notable for its ecological role, likely contributing to biogeochemical cycling in its native environment. While specific metabolic capabilities and habitat preferences are not provided, the simplicity of having a single replicon may suggest adaptations that allow for efficient replication and survival in a specific ecological niche. The genomic data associated with this organism could provide insights into its evolutionary strategies and interactions within microbial communities. The understanding of Rubrivirga sp. can help elucidate its function within ecosystems, particularly in environments where such bacteria might thrive. Its single replicon may also suggest evolutionary advantages in certain conditions, potentially allowing it to adapt quickly to environmental changes. Further research, focusing on its ecological interactions and metabolic processes, could enhance our understanding of its role in microbial diversity and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilyRubricoccaceae
GenusRubrivirga
SpeciesRubrivirga sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rubrivirga sp. isolate NP52 16110, whole genome shotgun

Gene Summary

Adenine Count

368720 bp

Thymine Count

373450 bp

Guanine Count

607658 bp

Cytosine Count

612370 bp

Genome Length

1965511 bp

Protein-coding Genes

1952 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh dehydrogenase subunit dCMN22_06325Not AvailablePositive1210757 - 121211249379.2
nadh-quinone oxidoreductase subunit eCMN22_06330Not AvailablePositive1212136 - 121277422984.2
nadh-quinone oxidoreductase subunit fCMN22_06335Not AvailablePositive1212774 - 121408447060.0
nadh-quinone oxidoreductase subunit gCMN22_06340Not AvailablePositive1214081 - 121646883986.5
nadh-quinone oxidoreductase subunit nuohCMN22_06345Not AvailablePositive1216465 - 121780848978.1
nadh-quinone oxidoreductase subunit nuoiCMN22_06350Not AvailablePositive1217753 - 121833421807.2
nadh:ubiquinone oxidoreductase subunit jCMN22_06355Not AvailablePositive1218352 - 121912527003.1
nadh-quinone oxidoreductase subunit nuokCMN22_06360Not AvailablePositive1219122 - 121942110673.5
nadh-quinone oxidoreductase subunit lCMN22_06365Not AvailablePositive1219472 - 122134066480.4
nadh-quinone oxidoreductase subunit mCMN22_06370Not AvailablePositive1221337 - 122288454997.2

Displaying genes 1251 – 1260 of 2004 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.