Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057484 bp
Thymine Count
1057212 bp
Guanine Count
1780830 bp
Cytosine Count
1777142 bp
Genome Length
5672672 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolaconase | CME87_21515 | Not Available | Positive | 4774654 - 4775535 | 32006.7 |
| iclr family transcriptional regulator | CME87_21520 | Not Available | Negative | 4775592 - 4776443 | 31645.1 |
| fuconate dehydratase | CME87_21525 | Not Available | Positive | 4776807 - 4778084 | 47621.2 |
| short-chain dehydrogenase | CME87_21530 | Not Available | Positive | 4778128 - 4778904 | 27853.2 |
| l-fucose mutarotase | CME87_21535 | Not Available | Positive | 4778912 - 4779265 | 13347.0 |
| d-xylose abc transporter atp-binding protein | CME87_21540 | Not Available | Positive | 4779468 - 4781024 | 56598.9 |
| abc transporter permease | CME87_21545 | Not Available | Positive | 4781068 - 4782108 | 36300.4 |
| bmp family abc transporter substrate-binding protein | CME87_21550 | Not Available | Positive | 4782191 - 4782571 | 13295.2 |
| dihydroxy-acid dehydratase | CME87_21555 | Not Available | Positive | 4782578 - 4783636 | 37226.0 |
| 2-dehydro-3-deoxyglucarate aldolase | CME87_21560 | Not Available | Positive | 4783710 - 4784495 | 27683.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



