Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057484 bp
Thymine Count
1057212 bp
Guanine Count
1780830 bp
Cytosine Count
1777142 bp
Genome Length
5672672 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate enol-lactonase | CME87_19670 | Not Available | Negative | 4364298 - 4365083 | 28035.5 |
| muconolactone delta-isomerase | CME87_19675 | Not Available | Negative | 4365161 - 4365448 | 10756.1 |
| lysr family transcriptional regulator | CME87_19680 | Not Available | Negative | 4365675 - 4366628 | 35933.5 |
| muconate cycloisomerase | CME87_19685 | Not Available | Positive | 4366773 - 4367966 | 42096.0 |
| catechol 1,2-dioxygenase | CME87_19690 | Not Available | Positive | 4368017 - 4368952 | 33660.8 |
| benzoate 1,2-dioxygenase large subunit | CME87_19695 | Not Available | Positive | 4369065 - 4370438 | 51940.9 |
| benzoate 1,2-dioxygenase small subunit | CME87_19700 | Not Available | Positive | 4370435 - 4370929 | 19487.8 |
| nadh oxidase | CME87_19705 | Not Available | Positive | 4370951 - 4371976 | 36190.3 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | CME87_19710 | Not Available | Positive | 4371973 - 4372761 | 27514.2 |
| hypothetical protein | CME87_19715 | Not Available | Positive | 4372796 - 4373206 | 14936.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



