Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057484 bp
Thymine Count
1057212 bp
Guanine Count
1780830 bp
Cytosine Count
1777142 bp
Genome Length
5672672 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | CME87_13165 | Not Available | Negative | 2913843 - 2914634 | 28117.9 |
| phenylacetic acid degradation protein | CME87_13170 | Not Available | Negative | 2914696 - 2915766 | 39695.4 |
| phenylacetate-coa oxygenase subunit paaj | CME87_13175 | Not Available | Negative | 2915803 - 2916336 | 19346.1 |
| phenylacetate-coa oxygenase subunit paai | CME87_13180 | Not Available | Negative | 2916333 - 2917085 | 28496.9 |
| 1,2-phenylacetyl-coa epoxidase subunit b | CME87_13185 | Not Available | Negative | 2917097 - 2917381 | 10578.6 |
| 1,2-phenylacetyl-coa epoxidase subunit a | CME87_13190 | Not Available | Negative | 2917475 - 2918461 | 37300.3 |
| phenylacetic acid degradation protein paay | CME87_13195 | Not Available | Negative | 2918590 - 2919192 | 21123.7 |
| tetr/acrr family transcriptional regulator | CME87_13200 | Not Available | Positive | 2919521 - 2920141 | 23442.6 |
| branched-chain amino acid abc transporter substrate-binding protein | CME87_13205 | Not Available | Positive | 2920214 - 2921359 | 40283.7 |
| phenylacetic acid degradation bifunctional protein paaz | CME87_13210 | Not Available | Positive | 2921432 - 2923492 | 73009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



