Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057484 bp
Thymine Count
1057212 bp
Guanine Count
1780830 bp
Cytosine Count
1777142 bp
Genome Length
5672672 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase i | CME87_08855 | Not Available | Positive | 1949773 - 1950786 | 36519.8 |
| alcohol dehydrogenase | CME87_08860 | Not Available | Negative | 1950891 - 1952249 | 48792.8 |
| isoquinoline 1-oxidoreductase | CME87_08865 | Not Available | Negative | 1952268 - 1954520 | 81282.4 |
| 2fe-2s ferredoxin | CME87_08870 | Not Available | Negative | 1954517 - 1955131 | 20870.2 |
| hypothetical protein | CME87_08875 | Not Available | Negative | 1955380 - 1955829 | 16078.4 |
| duf4160 domain-containing protein | CME87_08880 | Not Available | Negative | 1955826 - 1956254 | 16773.1 |
| galactose-1-epimerase | CME87_08885 | Not Available | Negative | 1956497 - 1957561 | 39134.8 |
| xylr family transcriptional regulator | CME87_08890 | Not Available | Negative | 1957558 - 1958823 | 46606.9 |
| d-xylose abc transporter substrate-binding protein | CME87_08895 | Not Available | Positive | 1959148 - 1960164 | 36729.4 |
| d-xylose abc transporter atp-binding protein | CME87_08900 | Not Available | Positive | 1960273 - 1961829 | 56213.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



