Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057484 bp
Thymine Count
1057212 bp
Guanine Count
1780830 bp
Cytosine Count
1777142 bp
Genome Length
5672672 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase | CME87_06285 | Not Available | Positive | 1381121 - 1382188 | 38601.3 |
| glutathione-dependent formaldehyde-activating protein | CME87_06290 | Not Available | Positive | 1382210 - 1382626 | 15690.8 |
| abc transporter substrate-binding protein | CME87_06295 | Not Available | Positive | 1383037 - 1383873 | 30768.2 |
| abc transporter permease | CME87_06300 | Not Available | Positive | 1383883 - 1384542 | 24299.5 |
| amino acid abc transporter atp-binding protein | CME87_06305 | Not Available | Positive | 1384552 - 1385325 | 27903.5 |
| dna-binding protein | CME87_06310 | Not Available | Positive | 1385661 - 1386326 | 24308.0 |
| serine dehydratase | CME87_06315 | Not Available | Positive | 1386400 - 1387377 | 34695.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | CME87_06320 | Not Available | Positive | 1387491 - 1387850 | 13257.1 |
| hypothetical protein | CME87_06325 | Not Available | Negative | 1388002 - 1388412 | 14611.7 |
| diguanylate cyclase | CME87_06330 | Not Available | Positive | 1388964 - 1390052 | 40396.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



