Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1057484 bp
Thymine Count
1057212 bp
Guanine Count
1780830 bp
Cytosine Count
1777142 bp
Genome Length
5672672 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CME87_05670 | Not Available | Positive | 1238625 - 1238813 | 7231.0 |
| hypothetical protein | CME87_05675 | Not Available | Positive | 1238912 - 1239538 | 21366.3 |
| type vi secretion system contractile sheath small subunit | CME87_05680 | Not Available | Positive | 1239630 - 1240130 | 18891.7 |
| type vi secretion system contractile sheath large subunit | CME87_05685 | Not Available | Positive | 1240142 - 1241635 | 54762.5 |
| type vi secretion system tube protein hcp | CME87_05690 | Not Available | Positive | 1241670 - 1242161 | 17886.2 |
| type vi secretion system baseplate subunit tsse | CME87_05695 | Not Available | Positive | 1242352 - 1242840 | 17859.4 |
| type vi secretion system baseplate subunit tssf | CME87_05700 | Not Available | Positive | 1242841 - 1244685 | 67732.2 |
| type vi secretion system baseplate subunit tssg | CME87_05705 | Not Available | Positive | 1244649 - 1245737 | 41343.6 |
| type vi secretion system atpase tssh | CME87_05710 | Not Available | Positive | 1245810 - 1248485 | 96909.4 |
| type vi secretion system tip protein vgrg | CME87_05715 | Not Available | Positive | 1248639 - 1251611 | 104974.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



