Herbaspirillum sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. is a Gram-negative bacterium characterized by the presence of flagella, which facilitates its motility. This genus is known for its ability to colonize plant roots, suggesting a potential role in promoting plant growth or aiding in nutrient acquisition. Herbaspirillum species typically have a single replicon, indicating a streamlined genetic organization that may contribute to their adaptability in various environments. The genome of Herbaspirillum sp. is represented in the accession number PBPP00000000.1, which provides a reference for further studies on its genetic makeup and functional capabilities. The presence of flagella may enhance its ability to navigate through soil and rhizosphere environments, allowing it to establish beneficial associations with plants. Ecologically, the interactions between Herbaspirillum sp. and plants could enhance nutrient cycling in terrestrial ecosystems. By colonizing plant roots, these bacteria may play a role in nitrogen fixation or the uptake of essential nutrients, thus contributing to plant health and agricultural productivity. The presence of such bacteria is significant in maintaining soil quality and promoting sustainable agricultural practices. Overall, Herbaspirillum sp. exemplifies the intricate relationships between soil microorganisms and plant life, highlighting the importance of microbial communities in ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Herbaspirillum sp. isolate RS355 TaraRedSea_contig_256401,

Gene Summary

Adenine Count

1057484 bp

Thymine Count

1057212 bp

Guanine Count

1780830 bp

Cytosine Count

1777142 bp

Genome Length

5672672 bp

Protein-coding Genes

5023 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporterCME87_05210Not AvailableNegative1124695 - 112593045025.3
hypothetical proteinCME87_05215Not AvailableNegative1126350 - 112806263559.4
peptide-methionine (s)-s-oxide reductaseCME87_05220Not AvailableNegative1128118 - 112881624611.1
sulfoxide reductase heme-binding subunit yedzCME87_05225Not AvailableNegative1128894 - 112955024662.3
protein-methionine-sulfoxide reductase catalytic subunit msrpCME87_05230Not AvailableNegative1129565 - 113053336228.7
dna-binding response regulatorCME87_05235Not AvailablePositive1130776 - 113144725393.9
two-component sensor histidine kinaseCME87_05240Not AvailablePositive1131444 - 113291053914.8
arsr family transcriptional regulatorCME87_05250Not AvailablePositive1134544 - 113511622162.8
allantoate amidohydrolaseCME87_05255Not AvailableNegative1135642 - 113742364381.1
purine permeaseCME87_05260Not AvailableNegative1137661 - 113905549011.6

Displaying genes 1101 – 1110 of 5118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.