Puniceicoccaceae bacterium

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Opitutia

Order

Puniceicoccales

Family

Puniceicoccaceae

Genus

Description

Puniceicoccaceae bacterium is characterized by its unique genomic structure, possessing a total of three replicons. These replicons are essential for the organism's genetic diversity and adaptability, as they can contain different sets of genes that may contribute to various metabolic functions. The bacterium has been cataloged under multiple accessions: PBLN00000000.1, PBYS00000000.1, and QOOZ00000000.1. These accession numbers indicate the organism's presence in genomic databases, providing a basis for further research and characterization. Each accession may represent different isolates or genomic sequences that contribute to our understanding of the species' genetic makeup and potential functionalities. Given its classification within the Puniceicoccaceae family, this bacterium may play a role in specific ecological niches, possibly participating in nutrient cycling or interactions within microbial communities. The presence of multiple replicons suggests a level of genomic plasticity that could allow Puniceicoccaceae bacterium to adapt to varying environmental conditions or to interact with other microorganisms effectively. In conclusion, the genomic architecture of Puniceicoccaceae bacterium, particularly its three replicons, alongside its documented accessions, highlights its potential significance in microbial ecology. Further studies could elucidate its role in specific environments and its interactions within microbial communities, contributing to our understanding of microbial diversity and function.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Puniceicoccaceae bacterium


Gene Summary

Adenine Count

418528 bp

Thymine Count

424153 bp

Guanine Count

423082 bp

Cytosine Count

416881 bp

Genome Length

1682644 bp

Protein-coding Genes

1480 genes

Non-Coding Genes

30 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kama family radical sam proteinDBX01_00050Not AvailablePositive10684 - 1187145331.4
duf481 domain-containing proteinDBX01_00055Not AvailableNegative12025 - 1302938135.9
ribonuclease yDBX01_00060Not AvailableNegative13026 - 1425545167.1
hypothetical proteinDBX01_00065Not AvailablePositive14560 - 1502617345.8
4-hydroxy-tetrahydrodipicolinate synthaseDBX01_00070Not AvailablePositive15027 - 152498065.82
4-hydroxy-tetrahydrodipicolinate reductaseDBX01_00075Not AvailablePositive15262 - 1599926359.5
holliday junction branch migration protein ruvaDBX01_00080Not AvailablePositive16007 - 1660621150.7
biopolymer transporter tolDBX01_00085Not AvailableNegative16641 - 1786144346.9
iron-sulfur cluster carrier protein apbcDBX01_00090Not AvailablePositive17971 - 1904437839.8
duf4032 domain-containing proteinDBX01_00095Not AvailablePositive19145 - 193638740.32

Displaying genes 11 – 20 of 7780 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.